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- | Equations | + | iGEM-CIDEB 2012 - Modelling Parameters |
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- | <a name="Equations"></a>Math Model Equations
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- | <p>The system of equations that describe the system (circuit) are presented here.</p>
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- | <p>The constants can be found in the parameters list in the column: C. Name.</p>
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- | <p>Describing the production of the protein araC.</p>
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- | <a href=" https://static.igem.org/mediawiki/2012hs/c/c4/Equation1.png | + | <a href=" hhttps://static.igem.org/mediawiki/2012hs/8/8c/Parameterstable.png |
| " rel="lightbox"> | | " rel="lightbox"> |
- | <img src=" https://static.igem.org/mediawiki/2012hs/c/c4/Equation1.png | + | <img src=" https://static.igem.org/mediawiki/2012hs/8/8c/Parameterstable.png |
- | "width="600px" height="169px" alt="Organization Chart" align="center"> | + | "width="600px" height="368px" alt="Organization Chart" align="center"> |
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| + | <p>According to Beijing 2009 we’ve decided to set all the mRNA half-lives to 4.4 min, all protein lives to 40 min with the exception of the ones that are in the table of the parameters.</p> |
| + | <p>The cell division rate will also be considered as 30 minutes long, so the degradation rates of the mRNA would be 1/4.4 + 1/30 min, and the protein degradation rates are: 1/40 + 1/30 min</p> |
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- | <a name="Highconcent"></a>High Concentration!
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- | <a href=" https://static.igem.org/mediawiki/2012hs/e/ea/Equation2.png
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- | <p>Due to Cambridge 2009 recommendations, we’ve decided to use the next expression to describe the concentration of the “active repressor”.</p>
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- | <p>(https://2009.igem.org/Team:Cambridge/Modelling)</p>
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- | <a href="https://static.igem.org/mediawiki/2012hs/e/ed/Equation3.png" rel="lightbox">
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- | <img src="https://static.igem.org/mediawiki/2012hs/e/ed/Equation3.png
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- | <p>A is the Arabinose concentration that can vary so it is not a constant.</p>
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- | <p><b>So the concentration of the protein YFP is presented as follow.</b></p>
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- | <a href=" https://static.igem.org/mediawiki/2012hs/b/b0/Equation4.png" rel="lightbox">
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- | <p><b>Production of mRNA for the protein cl434</b></p>
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- | <a href=" https://static.igem.org/mediawiki/2012hs/9/92/Equation5.png " rel="lightbox">
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- | <img src=" https://static.igem.org/mediawiki/2012hs/9/92/Equation5.png "width="488px" height="308px" alt="Organization Chart" align="center">
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- | <a name="Lowconcent"></a>Low Concentration!
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- | <a name="Standby"></a>Stand - By!
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- | <div class = "img-holder" style="width:398px; font-size: 18px;"> https://static.igem.org/mediawiki/2012hs/a/a1/Equation9.png " rel="lightbox">
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- | <img src="https://static.igem.org/mediawiki/2012hs/a/a1/Equation9.png"width="398px" height="374px" alt="Organization Chart" align="center">
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| <div class="br"></div><div class="br"></div><div class="br"></div><div class="br"></div<div class="br"></div><div class="br"></div><div class="br"></div><div class="br"></div | | <div class="br"></div><div class="br"></div><div class="br"></div><div class="br"></div<div class="br"></div><div class="br"></div><div class="br"></div><div class="br"></div |
| <p><b>References:</b><p> | | <p><b>References:</b><p> |