Team:CIDEB-UANL Mexico/Math/Equations1

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             Equations
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             iGEM-CIDEB 2012 - Modelling Parameters
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          <a name="Equations"></a>Math Model Equations
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<p>The system of equations that describe the system (circuit) are presented here.</p>
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<p>The constants can be found in the parameters list in the column: C. Name.</p>
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<p>Describing the production of the protein araC.</p>
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<a href=" https://static.igem.org/mediawiki/2012hs/c/c4/Equation1.png
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<p>According to Beijing 2009 we’ve decided to set all the mRNA half-lives to 4.4 min, all protein lives to 40 min with the exception of the ones that are in the table of the parameters.</p>
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<p>The cell division rate will also be considered as 30 minutes long, so the degradation rates of the mRNA would be 1/4.4 + 1/30 min, and the protein degradation rates are: 1/40 + 1/30 min</p>
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          <a name="Highconcent"></a>High Concentration!
 
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<p>Due to Cambridge 2009 recommendations, we’ve decided to use the next expression to describe the concentration of the “active repressor”.</p>
 
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<p>(https://2009.igem.org/Team:Cambridge/Modelling)</p>
 
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<p>A is the Arabinose concentration that can vary so it is not a constant.</p>
 
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<p><b>So the concentration of the protein YFP is presented as follow.</b></p>
 
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<p><b>Production of mRNA for the protein cl434</b></p>
 
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<p><b>References:</b><p>
<p><b>References:</b><p>

Revision as of 07:36, 17 June 2012

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Team: UANL_Mty-Mexico

Team: CIDEB-UANL Mexico

iGEM-CIDEB 2012 - Modelling Parameters

According to Beijing 2009 we’ve decided to set all the mRNA half-lives to 4.4 min, all protein lives to 40 min with the exception of the ones that are in the table of the parameters.

The cell division rate will also be considered as 30 minutes long, so the degradation rates of the mRNA would be 1/4.4 + 1/30 min, and the protein degradation rates are: 1/40 + 1/30 min

References:

  • https://2009.igem.org/Team:PKU_Beijing/Modeling/Parameters
  • https://2011.igem.org/Team:UANL_Mty-Mexico/Modelling/Parameters
  • https://2009.igem.org/Team:Cambridge/Modelling
  • https://2011.igem.org/Team:St_Andrews/modelling